Unfurling our heritage

by Vivienne Baillie Gerritsen

Our most precious things are kept where they meet the least damage. Out of reach on a shelf, in the depths of a drawer, deposited in a bank or perhaps parked in the garage. Frequently, too, a layer of protection is added by wrapping the valuable item in cloth or placing it in a padded box. Nature does exactly the same with one of its most treasured commodities: DNA. In eukaryotes, not only is our genetic heritage tucked away in the fortress-like nucleus of cells but it is also swathed in numerous molecules to form what is known as 'chromatin'. Protecting DNA is paramount, for obvious reasons. However, to survive, cells must have access to the genes their DNA carries in order to express them. This implies that cells need to dismantle the chromatin barrier, at different locations and at any given time. It's not so much dismantling chromatin, really, as remodelling it in such a way that genes are sporadically laid bare and thus open to transcription. One of the numerous proteins involved in chromatin remodelling is ATRX, so called because it is found on the X chromosome of mammals. An intriguing fact: in marsupials, ATRX is also found on their Y chromosome.

Protein Spotlight (ISSN 1424-4721) is a monthly review written by the Swiss-Prot team of the SIB Swiss Institute of Bioinformatics. Spotlight articles describe a specific protein or family of proteins on an informal tone. Follow us: Subscribe · Facebook · Linkedin

More from Protein Spotlight

LIFE, LOVE, DEATH & PROTEINS

La vie etc. cover

"La vie, l'amour, la mort & les protéines" (in French only) is a wonderful and unique collection of twenty comic strips created with cartoonist aloys lolo. Each comic describes one protein taken from the Protein Spotlight articles. The album was published in November 2023 by Antipodes, Switzerland. Order your copy online. English version online here.

Snapshot : Contulakin-G protein

In the summer of 1935, a young man was enjoying a stroll along the shores of Haymen Island off the coast of Australia when he tripped over an attractive – but live – cone shell which would have made an excellent paperweight back home. Such a destiny, however, was not to the shell’s taste and it retorted by stinging the man’s hand. Numbness, stiffness and soon paralysis of the victim’s limbs occurred before he became unconscious and dropped into a deep coma followed by death within the space of five hours. As for the cone shell, despite its rather strong protest, it didn’t gain its hoped-for freedom and was shipped back to the mainland.

A little bit of praise!

“I recently stumbled upon your columns. Let me congratulate you on achieving the near impossible, for your articles have enabled me to successfully marry IT with the Life Sciences and better explain the concepts of bioinformatics to those who are not in the know of the field.

Your articles are very well written, lucid, and contain just enough information to excite the reader to want to learn more about the topic being discussed. They fall in a very rare category where they are accessible to everyone, from the undergraduate students to research students who want to have a basic idea of the topics being discussed. Some of your articles, like "Our hollow architecture" and "Throb" are outstanding pieces.

I would highly recommend your articles as a necessary reading in undergrad classes to get students inspired about the various avenues of research.”

— Rohan Chaubal, Senior Researcher in Genomics

Thank you to Fania Simon whose work we reproduce on our site!